Search found 2 matches

by Jahabla
2019.03.04 21:58
Forum: Model evaluation and manipulation
Topic: Contribution of Glycosylation to the Ab initio model
Replies: 0
Views: 9008

Contribution of Glycosylation to the Ab initio model

Hello, I am wondering what is the overall experience with N-linked glycosylation contribution to the ab initio model - i.e. how much will be the glycan visible in the shape of the envelope. I am assuming that when the N-linked glycosylation is more or less flexible it wont be "visible" in the shape ...
by Jahabla
2017.11.08 23:53
Forum: Ab initio shape determination
Topic: DAMMIF defaults to prolate aniso, even when entering unk
Replies: 4
Views: 6489

Re: DAMMIF defaults to prolate aniso, even when entering unk

Hi Saxier, I am experiencing similar issue. If I cut my SAXS data at different points at the high angles sometimes DAMMIF assumes oblate anisotropy and flat shape class, while sometimes it designates these values as unknown. Moreover, I get very different results from the flat-DAMMIF vs. DAMMIN, whi...