Search found 4 matches

by Loki03
2019.05.12 18:25
Forum: Mixtures and Flexible Systems
Topic: How to use EOM on glycosylated proteins
Replies: 6
Views: 6679

Re: How to use EOM on glycosylated proteins

Any idea if this can be solved?
by Loki03
2019.04.30 16:15
Forum: Mixtures and Flexible Systems
Topic: How to use EOM on glycosylated proteins
Replies: 6
Views: 6679

Re: How to use EOM on glycosylated proteins

It doesn't match with the sequence file - my pdb with glycosylation added by a different software or with glycosylation added by the GLYCOSYLATION.
It only runs if I dont specify the glycans at all. It still complaints of mismatch
by Loki03
2019.04.25 20:04
Forum: Mixtures and Flexible Systems
Topic: How to use EOM on glycosylated proteins
Replies: 6
Views: 6679

Re: How to use EOM on glycosylated proteins

Thank you AL.

Can I then run it in EOM? I tried to run it on my machine but it still asks for a sequence and then doesnt match it to the pdb that I glycosylated with the GLYCOSYLATION program.
Thanks
by Loki03
2019.04.20 12:08
Forum: Mixtures and Flexible Systems
Topic: How to use EOM on glycosylated proteins
Replies: 6
Views: 6679

How to use EOM on glycosylated proteins

Hello,
I am new to EOM and would like to ask how to use it for glycosylated proteins? I havent found a way to add the glycosylation into the .seg file.
Thank you for any suggestions.