Model evaluation and manipulation

New Topic

247 topics

Topics

Replies

Views

Last post

Ask about CRYSOL, CRYSON, CIFSUP, CIFOP, DAMAVER, DARA

Last post by AL « 2023.02.23 19:21
Replies: 2
by AL » 2007.08.20 11:58

2 Replies

15424 Views

Last post by AL
2023.02.23 19:21
Gnom error nonrandom residuals after smoothing

Last post by sammahdi « 2023.06.06 18:32
Replies: 7
by sammahdi » 2023.06.03 04:16

7 Replies

280 Views

Last post by sammahdi
2023.06.06 18:32
Why do my SAXS fit chi2 correlate with concentration?

Last post by sammahdi « 2023.06.03 04:10
Replies: 4
by sammahdi » 2023.05.02 04:06

4 Replies

263 Views

Last post by sammahdi
2023.06.03 04:10
Damaver/Damsup atsas 3.0

Last post by TylerMrozowich « 2023.06.01 21:49
Replies: 2
by TylerMrozowich » 2023.05.31 17:59

2 Replies

106 Views

Last post by TylerMrozowich
2023.06.01 21:49
What is r0 and how to manually set it

Last post by AL « 2023.05.02 14:48
Replies: 3
by sammahdi » 2023.04.28 03:49

3 Replies

175 Views

Last post by AL
2023.05.02 14:48
Best practices for solvent density and hydration shell

Last post by sammahdi « 2023.02.27 22:05
Replies: 4
by sammahdi » 2023.02.01 21:07

4 Replies

648 Views

Last post by sammahdi
2023.02.27 22:05
Trouble running SASPy

Last post by AL « 2023.02.23 19:25
Replies: 4
by Noya » 2022.01.12 11:39

4 Replies

1111 Views

Last post by AL
2023.02.23 19:25
How to fix hydration shell for fitting?

Last post by AL « 2023.02.07 12:03
Replies: 5
by sammahdi » 2023.02.05 22:46

5 Replies

329 Views

Last post by AL
2023.02.07 12:03
CRYSOL FIT : which dat file to use

Last post by AL « 2022.12.05 15:48
Replies: 1
by njavid » 2022.11.29 23:54

1 Replies

703 Views

Last post by AL
2022.12.05 15:48
Crysol Errors

Last post by franke « 2022.10.04 12:51
Replies: 2
by tcrmcdonnell » 2022.09.29 20:13

2 Replies

777 Views

Last post by franke
2022.10.04 12:51
error while running crysol

Last post by abbas « 2022.09.13 14:24
Replies: 4
by abbas » 2022.09.05 17:54

4 Replies

548 Views

Last post by abbas
2022.09.13 14:24
CRYSOL 2.8.3 vs 2.8.4 release notes

Last post by AL « 2022.03.25 15:47
Replies: 1
by clb1e21 » 2022.03.14 15:22

1 Replies

1128 Views

Last post by AL
2022.03.25 15:47
CRYSOL - strange behaviour with long molecules

Last post by mawhite « 2022.03.01 18:19
Replies: 3
by polysaccharideGuy » 2019.12.13 01:56

3 Replies

5708 Views

Last post by mawhite
2022.03.01 18:19
Change limits on fitting parameters: command line

Last post by AL « 2021.07.21 16:33
Replies: 1
by dmichala » 2021.06.22 19:29

1 Replies

2478 Views

Last post by AL
2021.07.21 16:33
Resolution parameters in CRYSON at different camera lengths

Last post by mj « 2021.06.04 22:16

by mj » 2021.06.04 22:16

0 Replies

2323 Views

Last post by mj
2021.06.04 22:16
Cryson. Individual chain perdeuteration option

Last post by AL « 2021.05.31 09:51
Replies: 1
by Olga » 2021.05.04 18:32

1 Replies

1986 Views

Last post by AL
2021.05.31 09:51
CRYSOL

Last post by AlinaK « 2021.04.22 09:19
Replies: 4
by AlinaK » 2020.11.30 10:08

4 Replies

2932 Views

Last post by AlinaK
2021.04.22 09:19
Opening and modifying ab initio envelope and model in pymol

Last post by AL « 2021.03.15 21:18
Replies: 3
by asestok » 2021.02.09 03:42

3 Replies

2730 Views

Last post by AL
2021.03.15 21:18
Can someone please evaluate the accuracy of this p24 protein (6mqa) model made on PyMol?

Last post by dibdin « 2020.12.24 20:30

by dibdin » 2020.12.24 20:30

0 Replies

3729 Views

Last post by dibdin
2020.12.24 20:30
Trouble Looping Missing Regions For Subsequent BilboMD

Last post by cjuark « 2020.09.15 21:41
Replies: 1
by cjuark » 2020.09.15 21:20

1 Replies

2380 Views

Last post by cjuark
2020.09.15 21:41
Include explicit water in Crysol

Last post by emartin1 « 2020.04.20 23:49

by emartin1 » 2020.04.20 23:49

0 Replies

5009 Views

Last post by emartin1
2020.04.20 23:49
Trying to run DAMSEL with an input file detailing a bunch of PDB files

Last post by AL « 2020.02.26 16:07
Replies: 1
by PedroJSilva » 2020.02.06 21:15

1 Replies

3110 Views

Last post by AL
2020.02.26 16:07
Running DAMAVER output through DAMMIN for refinement

Last post by cjuark « 2020.02.12 07:00
Replies: 3
by Mr Chips » 2009.10.01 16:34

3 Replies

6528 Views

Last post by cjuark
2020.02.12 07:00
ATSAS 3.0 damaver error

Last post by AL « 2019.11.20 07:10
Replies: 2
by jbhopkins » 2019.11.07 18:21

2 Replies

4212 Views

Last post by AL
2019.11.20 07:10
Tip for Damaver Error: opening amplitudes file

Last post by LFRodrigues « 2019.10.01 17:08

by LFRodrigues » 2019.10.01 17:08

0 Replies

8210 Views

Last post by LFRodrigues
2019.10.01 17:08
cryson output.fit

Last post by SaxsMax « 2019.09.27 16:35
Replies: 1
by sas129 » 2019.09.20 07:55

1 Replies

3462 Views

Last post by SaxsMax
2019.09.27 16:35
Generate theoretical I vs q curves

Last post by AL « 2019.05.31 11:40
Replies: 5
by prithaghosh » 2019.04.25 17:20

5 Replies

15260 Views

Last post by AL
2019.05.31 11:40
Unexpected behavior of CRYSOL

Last post by SaxsMax « 2019.05.13 09:59
Replies: 1
by mattia.b » 2019.05.08 14:26

1 Replies

6143 Views

Last post by SaxsMax
2019.05.13 09:59
CRYSOL error: Fortran run-time error

Last post by asementilli « 2019.04.27 19:37
Replies: 4
by asementilli » 2019.04.13 18:12

4 Replies

8778 Views

Last post by asementilli
2019.04.27 19:37
User control of hydration layer contrast in crysol 3.0

Last post by SaxsMax « 2019.03.21 11:25
Replies: 1
by Maniac_from_CPH » 2019.03.20 17:28

1 Replies

6587 Views

Last post by SaxsMax
2019.03.21 11:25
Contribution of Glycosylation to the Ab initio model

Last post by Jahabla « 2019.03.04 21:58

by Jahabla » 2019.03.04 21:58

0 Replies

13375 Views

Last post by Jahabla
2019.03.04 21:58
resolution effects in Cryson via the fourth column

Last post by anlarsen « 2019.02.06 18:56
Replies: 2
by anlarsen » 2019.01.24 10:06

2 Replies

7429 Views

Last post by anlarsen
2019.02.06 18:56
CRYSOL: Maximum in I(q) at q=0?

Last post by AL « 2019.02.05 11:31
Replies: 1
by dwinogra » 2019.01.19 09:07

1 Replies

6420 Views

Last post by AL
2019.02.05 11:31
How to trim SAXS data that it won't come useless

Last post by AL « 2018.11.14 18:31
Replies: 1
by Mika » 2018.10.16 10:01

1 Replies

8160 Views

Last post by AL
2018.11.14 18:31
Comparison of the fitting results of FoXS and Crysol

Last post by change « 2018.09.28 09:31

by change » 2018.09.28 09:31

0 Replies

15011 Views

Last post by change
2018.09.28 09:31
Appropriate Solvent Density for CRYSOL modeling

Last post by chubetty « 2018.08.20 20:42

by chubetty » 2018.08.20 20:42

0 Replies

15222 Views

Last post by chubetty
2018.08.20 20:42
Criteria for selecting models from Crysol output

Last post by AL « 2018.08.15 13:56
Replies: 2
by asharma » 2018.08.14 16:15

2 Replies

8205 Views

Last post by AL
2018.08.15 13:56
CRYSOL Experimental data fitting

Last post by Somag « 2018.04.26 16:12

by Somag » 2018.04.26 16:12

0 Replies

14605 Views

Last post by Somag
2018.04.26 16:12
Trouble in data collection or analysis

Last post by Hayds « 2018.04.20 12:44
Replies: 2
by kermani » 2018.04.10 22:19

2 Replies

7788 Views

Last post by Hayds
2018.04.20 12:44
CRYSOL with multiple unit cells of PDB structure?

Last post by AL « 2018.03.26 11:42
Replies: 1
by akowals3 » 2018.03.21 23:26

1 Replies

14695 Views

Last post by AL
2018.03.26 11:42
volumes in CRYSON

Last post by Anne M « 2018.02.23 19:14

by Anne M » 2018.02.23 19:14

0 Replies

13325 Views

Last post by Anne M
2018.02.23 19:14
SASREF problem in SASPy

Last post by sasha « 2017.12.18 12:42
Replies: 2
by Pernille » 2017.12.05 13:58

2 Replies

8533 Views

Last post by sasha
2017.12.18 12:42
Deriving chi2 from two SAXS curves

Last post by sanaullah « 2017.10.06 11:08
Replies: 2
by sanaullah » 2017.10.04 15:50

2 Replies

8469 Views

Last post by sanaullah
2017.10.06 11:08
Cryson .fit files 3 or 4 columns

Last post by Anne M « 2017.09.21 15:33
Replies: 2
by Anne M » 2017.09.20 16:03

2 Replies

8032 Views

Last post by Anne M
2017.09.21 15:33
Could we use Crysol with specific Q-ranges

Last post by sanaullah « 2017.09.12 11:17
Replies: 3
by sanaullah » 2016.01.29 16:24

3 Replies

9442 Views

Last post by sanaullah
2017.09.12 11:17
Obtaining Profiles With Explicit Waters

Last post by SaxsMax « 2017.06.19 12:47
Replies: 2
by pmanninghall » 2017.06.01 07:24

2 Replies

8855 Views

Last post by SaxsMax
2017.06.19 12:47
Force enantiomer creation

Last post by sasha « 2017.06.15 15:54
Replies: 6
by tdgrant1 » 2011.10.06 21:34

6 Replies

16477 Views

Last post by sasha
2017.06.15 15:54
Damaver error

Last post by ankimble « 2017.06.05 23:47

by ankimble » 2017.06.05 23:47

0 Replies

13170 Views

Last post by ankimble
2017.06.05 23:47
Volumes used by crysol

Last post by SaxsMax « 2017.05.31 13:49
Replies: 5
by Nicholas » 2017.04.27 14:22

5 Replies

11588 Views

Last post by SaxsMax
2017.05.31 13:49
Atomic form factors and incoherent scattering in Cryson

Last post by SaxsMax « 2017.05.31 12:18
Replies: 1
by anlarsen » 2017.05.30 08:04

1 Replies

7701 Views

Last post by SaxsMax
2017.05.31 12:18

New Topic

247 topics

Return to Board Index

Forum permissions

You cannot post new topics in this forum
You cannot reply to topics in this forum
You cannot edit your posts in this forum
You cannot delete your posts in this forum
You cannot post attachments in this forum