Can someone please evaluate the accuracy of this p24 protein (6mqa) model made on PyMol?

Calculation of SAXS and SANS profiles (CRYSOL, CRYSON), superposition of models (SUPCOMB, DAMAVER, DAMCLUST), database DARA, PyMOL plugin SASpy
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dibdin
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Can someone please evaluate the accuracy of this p24 protein (6mqa) model made on PyMol?

#1 Post by dibdin » 2020.12.24 20:30

I made this model of the p24 protein, HIV capsid, on PyMol. The code on PDB is 6mqa. I indicated the active site by identifying the isolated amino acid sequence, however I am not sure if what I've done is accurate. Please let me know if I have identified the active site correctly and if all the markings and measurements are correct.
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HIV-1 capsid active site - attempt 1.png
HIV-1 capsid active site - attempt 1.png (475.77 KiB) Viewed 1693 times

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