Because chi square free is considerably more computationally intensive, please compile locally to optimize for your system and install the OpenMP libraries to enable multithreading. This is only for linux at this point.
Download:
http://realspace.uchicago.edu/wordpress ... ree.tar.gz
More info:
http://realspace.uchicago.edu/~fullerj@ ... .edu/?p=46
Example usage (where <NS> = the number of nyquist shannon bins and N is the desired subset size):
Code: Select all
./mesfree masterfilelist --threads 4 --population-size 20000 --max-iterations 10000 --num-runs 10 --max-time 14400 --ns <NS> --local-step 15 --output-file mesN.fit --subset-size N > mesN.out