Interactive modelling (MASSHA, SASpy) and global minimization programs (SASREF, BUNCH, CORAL, GLOBSYMM)
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jaala
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#1
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by jaala » 2019.11.15 00:53
I'm trying to use pre-bunch with 3 domains and after I input the 3 pdb file names it says:
Number of residues read (pdb): 71
Aligned first residue at: 203
Aligned last residue at: 273
Then it continues to ask me to input pdb file name and will not continue to the next step (Shift the structure to origin?).
I was hoping for some advice on what I may be doing wrong.
Thank you,
Jaala
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AL
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#2
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by AL » 2019.11.20 07:00
Does your file name contain special characters, spaces etc.?
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jaala
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#3
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by jaala » 2019.11.23 01:09
No special characters.
Jaala
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AL
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#4
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by AL » 2019.12.03 12:57
jaala wrote: ↑2019.11.15 00:53
...Then it continues to ask me to input pdb file name and will not continue to the next step...
This means
pre_bunch cannot find the pdb file. Are you are running
pre_bunch from the command line in the folder with your pdb files?
