Pre-bunch Issue

Interactive modelling (MASSHA, SASpy) and global minimization programs (SASREF, BUNCH, CORAL, GLOBSYMM)
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jaala
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Pre-bunch Issue

#1 Post by jaala » 2019.11.15 00:53

I'm trying to use pre-bunch with 3 domains and after I input the 3 pdb file names it says:

Number of residues read (pdb): 71
Aligned first residue at: 203
Aligned last residue at: 273

Then it continues to ask me to input pdb file name and will not continue to the next step (Shift the structure to origin?).
I was hoping for some advice on what I may be doing wrong.

Thank you,

Jaala

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AL
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Check your file name

#2 Post by AL » 2019.11.20 07:00

Does your file name contain special characters, spaces etc.?

jaala
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Re: Pre-bunch Issue

#3 Post by jaala » 2019.11.23 01:09

No special characters.

Jaala

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AL
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Re: Pre-bunch Issue

#4 Post by AL » 2019.12.03 12:57

jaala wrote:
2019.11.15 00:53
...Then it continues to ask me to input pdb file name and will not continue to the next step...
This means pre_bunch cannot find the pdb file. Are you are running pre_bunch from the command line in the folder with your pdb files?

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