Refinement with DAMMIN

Ab initio modelling: DAMMIF, DAMMIN, GASBOR, MONSA
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prithaghosh
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Posts: 12
Joined: 2019.02.22 18:20

Refinement with DAMMIN

#1 Post by prithaghosh » 2019.12.04 14:48

Dear SAXIER users,

I have been using the standalone version of ATSAS. I want to refine the DAMSTART model using DAMMIN. However, if I understand correctly, DAMMIN accepts only GNOM files as an input. How can I provide the damstart.pdb as an input to the standalone DAMMIN program?

Thank you.

Regards
Pritha

prithaghosh
Member
Posts: 12
Joined: 2019.02.22 18:20

Re: Refinement with DAMMIN

#2 Post by prithaghosh » 2019.12.10 15:29

Dear SAXIER users,

I could troubleshoot the issue with suggestions from Dr. Al Kikhney. In order to run DAMMIN with a starting model, alongside a GNOM output file, the program should be launched in an interactive "expert" mode. Subsequently, when prompted by the program for a starting model, the DAMSTART model can be provided as an input.

Hope this helps!

Regards
Pritha

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